Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015879722.1_cds_XP_016437266.1_33044
CDS Infomation

[gene=LOC107763302] [db_xref=GeneID:107763302] [protein=protein PHYTOCHROME KINASE SUBSTRATE 1-like] [protein_id=XP_016437266.1] [location=complement(9435..10859)] [gbkey=CDS]
Sequence

ATGGCTATGGTTAAAGTGACTTCAACACTAGAATCCAACATCCCAAACAACTTCAACACA
AAAAGTGACAGTGTTTTTCAAGATGCCTCATTTTCTTCTTACTTAAATGGTGCTGAAGAT
ACCTTTGTACTCAATCTTGAGCCAAGTGGAAATTTGAGCAAGAAAGCAGATGATGGTGAA
ATAGATATCTTTAGTGCAGAAAAATACTTCAATGAAGGGGTTGATGAAGAAAATCAAGAA
AATGCCACAAATAGTGAATCACAAAACAAACACAAGATTGATGAGGCAGCTACTAATATA
GCTTTATTGAAGCAAAAAATTAGGCCTAAAACTCCAAGTATTCATTCAGAATCAAGTTGG
AATAGTAGAAGTGCATTATTGCAAAATATTTCAAGAAATCATCAGCATCAGACACCAACA
AAGACCAATAACAAGTCTTATGGCAAGAAATTCCTAGCCAGAATTGGCTGCAATTGTTAT
TGTAAAGACAAGAACTCTGTTAAGGTTGATGATCAAGTCGGCGGAAACAGTTTCAACAGT
GGAAAATATCATGGAAAATCAAAACAAAACCCCATCAAAACAAGAAGCTTAGCTCAAAGT
TCTGAGTCCAGTACAAGAGGAGCTAATCATCAAGATTTACATTTCAAGAAAATTGATGAA
TTGGGATTTGGAAAGGTTCCGGTTTTCGATCCTATAGCTGGAAATCCAGGTGTAAAGATA
CAACTGCAAAAGGAAGAAGACATCAAAAGAAAGTCCCTAGAAGTGTTTGGCTCTTCATTA
ACAGAGAAAGAAAGAACCAAACTGAGCCTTGAGAAAAAGGTAAGTATGTTAGCTTGGGAT
GCAATTGCTACAAAACCTGAAGAAATTGATATTATCAATATAGGAGCAAGTTCAGGTACA
TATGAGGATGATTATGCAGAAAGTGATGCAAGTTCAGATTTATTTGAGATTGAAAGTTTT
CCAAGTAATAATACAGCAAATCCAAGTTTTGTTAGACAAGGTTCAGATGGTATGTCATGT
TATGCTCCAAGTGAAGTTAGTATTGATTGGAGTGTGGTTACTGCTAGTGCTGCTGATTTC
TCTATAATGTCTGATTCAGAAGACATGAAAATTTCATCAATTAGAACCAAGTATGGGAAA
GAAACAGCAGGGAGAGAGAAAGCGAAACGTCGTTCGGGCACTTTTTTAGGATGTAATAGT
CATAAAGCTGTTGGAGTTGTGGGAGATGCATATAAAGGTAGTGAAAAAACATCAATGGAG
ATGACTCAGAGGCAGTTAAAAACTGAGTGTGTTGTGCCAATGACAAGATTTCATGCTGAG
AGTAAGATGAGTAGATTTGATAGCGGAAATAGGAAACATGAATTTACTACAAGATCATTC
TCTAGTTCATATACTGGACGTCCTGCAGATTTCTTGTATATTTAG

Peptide Sequence

PEP ID

XP_016437266.1
PEP Infomation

PREDICTED: protein PHYTOCHROME KINASE SUBSTRATE 1-like [Nicotiana tabacum]
Sequence

MAMVKVTSTLESNIPNNFNTKSDSVFQDASFSSYLNGAEDTFVLNLEPSGNLSKKADDGE
IDIFSAEKYFNEGVDEENQENATNSESQNKHKIDEAATNIALLKQKIRPKTPSIHSESSW
NSRSALLQNISRNHQHQTPTKTNNKSYGKKFLARIGCNCYCKDKNSVKVDDQVGGNSFNS
GKYHGKSKQNPIKTRSLAQSSESSTRGANHQDLHFKKIDELGFGKVPVFDPIAGNPGVKI
QLQKEEDIKRKSLEVFGSSLTEKERTKLSLEKKVSMLAWDAIATKPEEIDIINIGASSGT
YEDDYAESDASSDLFEIESFPSNNTANPSFVRQGSDGMSCYAPSEVSIDWSVVTASAADF
SIMSDSEDMKISSIRTKYGKETAGREKAKRRSGTFLGCNSHKAVGVVGDAYKGSEKTSME
MTQRQLKTECVVPMTRFHAESKMSRFDSGNRKHEFTTRSFSSSYTGRPADFLYI

Transcript Sequence

Gene sequence data has not been registered.